CLUSTAL-Omega
Performing Multiple Sequence Alignment with Clustal-Omega
Clustal Omega is a new multiple sequence alignment program that uses seeded guide trees and HMM profile-profile techniques to generate alignments between
three or more sequences
. For more information:
Clustal Omega Help & Documentation
STEP 1.- Enter your input sequences
Uniprot IDs
Enter a set of Uniprot IDs separated by commas (e.g: P69905,P01942,P13786).
Protein sequences (in FASTA)
Paste a set of protein sequences in FASTA format (e.g.: >P69905...).
Upload multi-FASTA file:
STEP 2.- Set your parameters
Output format:
FASTA
Clustal
MSF
PHYLIP
SELEX
STOCKHOLM
VIENNA
Output order:
Input order
Aligned order
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